Cheesy Protein Egg Muffins

Cheesy Protein Egg Muffins

Save this recipe on:

Cheesy Protein Egg Muffins are the perfect grab-and-go breakfast for anyone looking to start the day with a delicious, protein-packed bite. These muffins are fluffy, cheesy, and loaded with colorful veggies that add both flavor and nutrients. Whether you’re meal prepping for the week or need something quick before work, these little gems will keep you satisfied and energized.

Made with simple ingredients like eggs, cheese, and chopped vegetables, these muffins are endlessly customizable to your taste. You can keep them vegetarian or toss in diced ham, turkey, or cooked bacon for an extra boost. They’re baked in muffin tins, making them portion-controlled and freezer-friendly—ideal for busy mornings or post-workout snacks.


Why You’ll Love These Cheesy Protein Egg Muffins

  • High in protein: Each muffin is loaded with eggs and cheese to help fuel your morning.
  • Great for meal prep: Make a batch on Sunday and enjoy all week.
  • Customizable: Mix in your favorite veggies or proteins.
  • Kid-approved: Even picky eaters love the cheesy goodness.
  • Freezer-friendly: Store extras in the freezer for a quick reheat breakfast.

Preparation Phase & Tools to Use

Before you dive into making these cheesy egg muffins, gather your essentials. Having the right tools will make prep smoother and clean-up quicker.

  • Muffin tin (12-cup or silicone): Crucial for shaping and baking your egg muffins. Silicone tins help prevent sticking.
  • Mixing bowls: Use one large bowl for the egg mixture and a smaller one for chopped vegetables.
  • Whisk or fork: To beat the eggs until well combined.
  • Measuring cups & spoons: Accuracy matters for a perfect flavor balance.
  • Non-stick spray or parchment liners: Keeps your muffins from sticking to the pan.

These simple tools turn your kitchen into an efficient breakfast-making station. Now you’re ready to whip up a batch of warm, fluffy, cheesy goodness.


Pin this Recipe

Ingredients for the Cheesy Protein Egg Muffins

  • Eggs: The base of this recipe and your main protein source.
  • Shredded cheese: Adds creaminess and a savory kick. Cheddar or a cheese blend works great.
  • Bell peppers (red, green, yellow): Provide a sweet crunch and vibrant color.
  • Onion: Brings depth and aroma to each bite.
  • Milk or cream: Adds a bit of richness to the egg mixture.
  • Salt & pepper: Essential seasonings to elevate flavor.
  • Fresh parsley or chives: Optional, but great for a herby finish.
  • Optional proteins: Cooked bacon, turkey, ham, or sausage can be added for extra protein.

How To Make the Cheesy Protein Egg Muffins

Step 1: Preheat & Prep

Preheat your oven to 375°F (190°C). Lightly grease a muffin tin with non-stick spray or line with silicone muffin cups.

Step 2: Whisk the Eggs

In a large bowl, crack the eggs and whisk them until fully blended. Add in the milk or cream, salt, and pepper. Whisk again until smooth.

Step 3: Add the Fillings

Fold in the shredded cheese, chopped bell peppers, onion, and any cooked meats or herbs you’re using.

Step 4: Pour Into Muffin Tin

Evenly divide the egg mixture between the 12 muffin cups. Fill each cup about 3/4 of the way full.

Step 5: Bake to Perfection

Bake in the preheated oven for 20-25 minutes, or until the muffins are puffed up and golden on top. A toothpick inserted in the center should come out clean.

Step 6: Cool & Serve

Let the muffins cool in the tin for 5 minutes before removing. Serve warm or store for later.


How to Serve & Store Cheesy Protein Egg Muffins

These muffins are incredibly versatile:

  • Serve warm with toast, fruit, or on their own.
  • Wrap in foil or store in containers for breakfast meal prep.
  • Reheat in the microwave for 30 seconds to 1 minute.
  • Freeze in airtight bags for up to 2 months. Defrost overnight or reheat directly from frozen.

Great for lunchboxes, post-gym snacks, or hosting brunches!


Frequently Asked Questions

How long do these muffins last in the fridge?

Stored in an airtight container, they last up to 5 days in the fridge.

Can I use egg whites instead of whole eggs?

Yes! Replace each whole egg with two egg whites for a lower-fat version.

What vegetables work best?

Bell peppers, onions, spinach, zucchini, and mushrooms are all great options.

Can I make these dairy-free?

Absolutely. Use a dairy-free cheese and skip the milk or use a plant-based alternative.

How do I keep them from sticking to the pan?

Use a non-stick muffin pan, silicone liners, or generously spray each cup with oil.

Can I double the recipe?

Definitely! Just use two muffin tins or bake in batches.


Want More Breakfast Ideas?

If you love these Cheesy Protein Egg Muffins, you might also enjoy:


Save This Pin For Later

📌 Save this recipe to your Pinterest breakfast board so you can come back to it any time.

And let me know in the comments how yours turned out. Did you stick with veggies or add bacon? Any favorite cheese combo?

I love hearing how you personalize these recipes. Questions are welcome too—let’s keep each other inspired!

Find more wholesome meal prep ideas on my Pinterest board.


Print
clock clock iconcutlery cutlery iconflag flag iconfolder folder iconinstagram instagram iconpinterest pinterest iconfacebook facebook iconprint print iconsquares squares iconheart heart iconheart solid heart solid icon
Cheesy Protein Egg Muffins

Cheesy Protein Egg Muffins


5 Stars 4 Stars 3 Stars 2 Stars 1 Star

No reviews

  • Author: Kate Walton
  • Total Time: 35 minutes
  • Yield: 12 muffins

Description

Start your day right with these Cheesy Protein Egg Muffins—a high-protein, meal-prep-friendly breakfast option packed with eggs, cheese, and vegetables. Perfect for low-carb or keto lifestyles, these egg muffins are easy to freeze, reheat, and customize.


Ingredients

12 large eggs

1/3 cup milk or cream

1 cup shredded cheddar cheese

1/2 cup red bell pepper, diced

1/2 cup green bell pepper, diced

1/4 cup onion, finely chopped

1/4 teaspoon salt

1/4 teaspoon black pepper

2 tablespoons chopped parsley or chives (optional)

1/2 cup cooked bacon or ham, diced (optional)


Instructions

1. Preheat oven to 375°F (190°C). Grease a 12-cup muffin tin or use silicone liners.

2. In a large bowl, whisk together eggs, milk, salt, and pepper until smooth.

3. Stir in cheese, peppers, onion, herbs, and any optional meat.

4. Pour mixture evenly into muffin cups, filling each about 3/4 full.

5. Bake for 20–25 minutes or until muffins are set and golden on top.

6. Let cool for 5 minutes before removing from the pan. Serve or store.

Notes

Make sure to whisk eggs thoroughly to create a fluffy texture.

Use silicone muffin liners for easy cleanup and perfect release.

Don’t overbake—the muffins should be just set in the center.

  • Prep Time: 10 minutes
  • Cook Time: 25 minutes
  • Category: Breakfast
  • Method: Baked
  • Cuisine: American

Nutrition

  • Serving Size: 1 muffin
  • Calories: 125
  • Sugar: 1g
  • Sodium: 210mg
  • Fat: 9g
  • Saturated Fat: 3g
  • Unsaturated Fat: 5g
  • Trans Fat: 0g
  • Carbohydrates: 2g
  • Fiber: 0g
  • Protein: 10g
  • Cholesterol: 165mg

Save this recipe on: